Translating a trillion points of data into therapies, diagnostics, and new insights into disease

When: November 4, 2015 @ 10:40 am – 11:40 am
Where: University Club, Ballroom A, 123 University Pl, Pittsburgh, PA 15213, USA

Daisuke Nakada Memorial Lecture, Biomedical Graduate Student Association Atul Butte, MD, PhD is the new Director of the new Institute of Computational Health Sciences (ICHS) at the University of California, San Francisco, and a Professor of Pediatrics.  Dr. Butte trained in Computer Science at Brown University, worked as a software[…]

Enabling Precision Genomics at an Enterprise Level

When: October 23, 2015 @ 11:00 am – 12:00 pm
Where: DBMI Conference Room 407 A/B, 5607 Baum Blvd, Pittsburgh, PA 15206, USA

You are invited to a special seminar on Friday, October 23, by Peter S. White, PhD, Rieveschl Professor of Pediatrics, director, Division of Biomedical Informatics, Cincinnati Children’s Hospital Medical Center; professor and chair, Department of Biomedical Informatics, University of Cincinnati College. The seminar, “Enabling Precision Genomics at an Enterprise Level,” will be at 11 a.m.[…]

CCD Journal Club

When: October 15, 2015 @ 12:00 pm – 2:00 pm
Where: 5607 Baum Blvd., Room 407B

  Presenter:  Fattaneh Jabbari (Advisor:  Greg Cooper) Food and drinks will be provided.

Semantic Processing of the Clinical Narrative – Methods and Applications

When: August 24, 2015 @ 10:00 am – 11:00 am
Where: Baum 407 A/B

You are invited to a Special Seminar on Monday, August 24th, given by Guergana Savova, PhD, Associate Professor, Boston Children’s Hospital and Harvard Medical School, who will be presenting a seminar on Monday, August 24th, at 10:00 AM titled “Semantic Processing of the Clinical Narrative – Methods and Applications”.   Abstract:[…]

Internal Advisory Board (IAB)

Internal Advisory Board (IAB) Members for the Center for Causal Discovery Patricia Beeson, PhD – Provost and Senior Vice Chancellor, University of Pittsburgh Nancy Davidson, MD – Director, University of Pittsburgh Cancer Institute Arjun Hattiangadi, MS, MBA – Manager International and Commercial Services Division, UPMC Farnam Jahanian, MS, PhD – […]

Big Data Integration for Precision Medicine

When: July 23, 2015 @ 10:30 am – 11:30 am
Where: Baum 407 A/B, 5607 Baum Boulevard, Pittsburgh, PA 15206, USA

“Big Data Integration for Precision Medicine: From Population to Single Cells”   Lana X. Garmire, PhD Assistant Professor Cancer Epidemiology Program University of Hawaii Cancer Center   Dr. Lana Garmire is a tenure track faculty member in translational bioinformatics at the University of Hawaii Cancer Center (UHCC). During her time[…]

Workshops

Fundamentals and Applications of Computational Causal Discovery in Biomedicine Monday, March 23, 2016 – 1:30-5 pm AMIA Joint Summits on Translational Science, San Francisco

Videos

CCD YouTube Channel (Distinguished Lectures in Causal Discovery, Causal Discovery with Biomedical Data short course) Summer Short Course 2016 Day 1 AM Session Part 1 Part 2 Part 3 Part 4 Day 1 PM Session Part 1 Part 2 Part 3 Day 2 Session Part 1 Part 2 Part 3 Day 3 […]

Open Learning Initiative Courses

Causality and Statistical Reasoning (CMU) Topics Covered Causation Association and Independence Causation to Association Association to Causation: Problems Association to Causation: Strategies   Big Data Science (BD2K-LINCS) Course Syllabus Overview of the NIH Common Fund LINCS Program Overview of the Data Signature Generation Centers (experiments and data) Meta-Data and Ontologies Data […]

Publications

  Publications of the Center for Causal Discovery 2020 Xue Y, Ding MQ, Lu X. Learning to Encode Cellular Responses to Systematic Perturbations with Deep Generative Models. bioRxiv. Jan 1, 2020. Liang L, Zhu K, Lu S. ORN: Extracting Latent Pathway Activities in Cancer with OR-gate Network. bioRxiv. Jan 1, […]

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